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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs11186333 chr10:92605119 A/G 9.07E-12 407 2.82 15.07 15.33 KM Plot
LGG rs11186368 chr10:92676575 T/C 1.16E-11 403 15.3 15.5 2.82 KM Plot
LGG rs11187058 chr10:82556022 C/T 2.3E-7 407 5.37 13.2 15.67 KM Plot
LGG rs111889691 chr10:920174 C/CAAAAAAAACA 2.06E-5 403 15.2 17.03 12.17 KM Plot
LGG rs11190154 chr10:101327399 A/G 2.63E-5 407 3 12.5 15.67 KM Plot
LGG rs111917613 chr11:2956749 A/AC 3.57E-5 400 15.57 14.73 15.53 KM Plot
LGG rs111948242 chr7:64936372 T/A 9.18E-8 400 15.57 15.2 2.27 KM Plot
LGG rs11195845 chr10:113984760 A/C 0.000197 402 15.32 14.6 8.97 KM Plot
LGG rs11195846 chr10:113985145 C/T 0.000169 407 15.33 14.6 8.97 KM Plot
LGG rs11198369 chr10:120102823 A/G 2.82E-5 407 15.87 15.83 15.3 KM Plot
LGG rs111988802 chr8:1731502 A/T 1.52E-6 397 15.33 15.43 5.42 KM Plot
LGG rs112003817 chr7:55980675 G/A 1.5E-10 407 15.2 15.93 7.8 KM Plot
LGG rs112017048 chr14:74329072 G/A 4.85E-14 406 15.15 16.9 2.75 KM Plot
LGG rs112020814 chr8:49701792 C/T 5.55E-16 407 15.7 13.13 5.17 KM Plot
LGG rs11202670 chr10:89945395 G/A 6.72E-5 404 14.78 18.72 5.52 KM Plot